Essentials of Mass Spectroscopy

Essentials-of-Mass-SpectroscopyMass spectroscopy is distinctly different from other spectroscopic techniques. It has found large number of applications in several areas of basic research and product development covering pharmaceuticals, foods, environmental pollution monitoring, doping investigation in sports, pesticide residue analysis, biochemistry, clinical investigations and petroleum products analysis. The increasing popularity of mass spectroscopy results from its ability to provide vital information on :

  • Molar and Isotopic masses
  • Molecular structure and formula confirmation
  • Positive identification of compounds present in complex mixtures

The present article is an attempt to provide a basic introduction to this versatile technique.

Mass Spectrometer Principles

The main objective of the mass spectrometer is to identify and quantify the components of a mixture. The molecule in its vapour state is bombarded with high energy electrons (generally around 70 ev). The energy of the electrons knocks an electron from the molecule resulting in a charged molecule which undergoes fragmentation to yield smaller molecules. The molecular ion and resulting fragments are separated according to their mass to charge ratios (m/z) using electrostatic fields or a combination of magnetic and electrostatic fields. The detector generates electrical signals depending on the number of specific m/z ratio ions striking it. The mass spectrum is recorded as vertical lines representing concentration of molecular fragments corresponding to the individual m/z values. The most intense peak of the spectrum is referred to as the base peak and peaks arising at m/z values greater than the base peak are referred to as isotopic peaks which arise due to the natural abundance of different isotopes of different elements present in the parent molecule.

A mass spectrometer essentially comprises of following components:

  • Sample inlet device
  • Ion source and ionization chamber
  • Mass analyzer
  • Detector
  • Output device

The details on these devices can be found in standard treatises. However, subsequent articles will cover the commonly used ionization processes and different mass analyzers.

It is important to realize that even an experienced mass spectroscopist cannot arrive at a definite structure from a number of probable structures. Structural conformation needs comparison with mass spectra of suspected compounds. Modern spectroscopic instruments do provide easy ready-made solutions through spectral search libraries containing mass spectral data bases of hundreds of compound categories. Spectral overlay helps narrow down on suspected compounds. Further confirmation can be reached from other physic- chemical studies and spectral data from other spectroscopy techniques.

Hyphenated techniques such as GC-MS, LC-MS are useful and extend the sensitivity of detection and selectivity by prior separation of complex mixture components before entering the mass spectrometer. Some of these techniques will be covered in subsequent articles.

About Dr. Deepak Bhanot

Dr Deepak Bhanot is a seasoned professional having nearly 30 years expertise beginning from sales and product support of analytical instruments. After completing his graduation and post graduation from Delhi University and IIT Delhi he went on to Loughborough University of Technology, UK for doctorate research in analytical chemistry. His mission is to develop training programs on analytical techniques and share his experiences with broad spectrum of users ranging from professionals engaged in analytical development and research as well as young enthusiasts fresh from academics who wish to embark upon a career in analytical industry.

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